Accessor for the "counts" slot of Enone object.

Accessor for the "counts" slot of Enone object.

Usage

Counts(object, slot = c("sample", "spike_in"), method)

Counts(object, slot = c("sample", "spike_in"), method) <- value

# S4 method for Enone,character,character
Counts(object, slot = c("sample", "spike_in"), method)

# S4 method for Enone,character,character,matrix
Counts(object, slot = c("sample", "spike_in"), method) <- value

Arguments

object

Enone.

slot

Which slot to get, one of sample or spike_in.

method

Which counts matrix to get, must be one of the raw or normalized counts matrix presented in the selected slot.

value

Raw or normalized counts matrix.

Value

matrix.