Select negative control genes for RUV normalization, positive
and negative evaluation genes for assessment.
Usage
GeneSelection(object, n.neg.control = 1000, n.pos.eval = 500, n.neg.eval = 500)
Arguments
- object
Enone object
- n.neg.control
Number of negative control genes for RUV normalization, default: 1000.
- n.pos.eval
Number of positive evaluation genes for wanted variation assessment, default: 500.
- n.neg.eval
Number of negative evaluation genes for unwanted variation assessment, default: 500.