Gene set selection

Select negative control genes for RUV normalization, positive and negative evaluation genes for assessment.

Usage

GeneSelection(object, n.neg.control = 1000, n.pos.eval = 500, n.neg.eval = 500)

Arguments

object

Enone object

n.neg.control

Number of negative control genes for RUV normalization, default: 1000.

n.pos.eval

Number of positive evaluation genes for wanted variation assessment, default: 500.

n.neg.eval

Number of negative evaluation genes for unwanted variation assessment, default: 500.

Value

list of genes